Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888152.1_cds_XP_016442696.1_37933
CDS Infomation

[gene=LOC107768106] [db_xref=GeneID:107768106] [protein=probable protein phosphatase 2C 33] [protein_id=XP_016442696.1] [location=complement(join(31754..32242,32330..32553,34043..34160,34250..34633,36516..36761))] [gbkey=CDS]
Sequence

ATGGGTTCCTGCTTATCATCTGAAAGCAGGAGCCCTCATCCCGGTTCTCCTGCATCTTCA
AGTAGGAAAAGGAAGAGCTCAAAAAAGAGGTTAGGTTCACGAAATTCTTCCTTCGACTAT
CATAAGGAAGAACTGCTGCATAGGATACCGGGGCGTATGTTCTTGAATGGTTCTAGTGAG
GTGGCTTCACTCTTCAGTCAGCAGGGCAACAAAGGCACTAATCAAGATGCTATGATTGTT
TGGGAGAATTTTGGTTCCAGAACAGATACTGTTTTCTGTGGTGTTTTTGACGGCCATGGT
CCTTACGGTCATATGGTTGCAAAGCGAGTCAGAGATGCTCTTCCTTTAAAGCTAAGCACA
CACTGGGAAGTTAATATAAAAAGTGAGGATGTTCTAAGAGAGATCAGTCTCAACAGAGGG
AGTAGCCTATATCCTGAGGATGCTTCCCTTATCTCTGAGGAGTCGAGAGTTTCAATTGAT
GTTGAAGATACTGAAAAGCACACAGAGGTGTTTCAAACGTTGAAGGAGTCATTTCTGAAG
GCTTATAAGGTTATGGATAGAGAGTTGAGAAGCTATACCAATATCGATTGCCTCTGTAGT
GGAACAACAGCAGTAACCCTAGTTAAACAGGGTAAGGATCTTGTTATTGGAAATATTGGG
GATTCTAGAGCTGTGCTGTGTACGAGAGGCGACGATGATTCTCTCACTGCAGTGCAATTG
ACAGTAGATCTTAAGCCCAATTTACCAGCGGAGGCTGAGAGGATTCGCAAATGTAAAGGG
CGAGTGTTTTCTCTTCATGATGAACCGGACGTTGCAAGAGTGTGGATGCCAAACAGCAAC
TCTCCTGGACTTGCCATGGCCCGTGCTTTTGGAGATTTTTGCCTCAAGGATTTTGGTGTC
ATCTCCGTGCCTGAAATTTCTTATAGGCGTTTATCTGAGAAAGATGAATTCATCATTCTG
GCGACAGATGGGATTTGGGACGTGCTTTCAAATGATGAAGTAGTGAAGATTGTAGCTTCG
GCTTCATCCCGTTCATTGGCAGCTCGATCACTTGTTGAAGTAGCTGTTCGAGCCTGGAAA
ACTACATATCCAACTTCTAAAGTCGATGACTGTGCAGTTGTCTGTCTCTTCCTAGATTCA
AACTCAAATAATTTCTCTACTGTTTCCATTACAAAAGACAATGACAAGACTGTAATGGGA
ATGAGCGAAGGTGGCAACGAGATGGATGCTGCACCTAGTCCACCTGCATTGAATCGCGTT
GGTACTGTTCGAGAAGATGAAGTTTCAGCAGGCAGCAAAGAGGAAGCCTCGGAACAGGAA
GAGTTGCTACCGAAGATGGGGAAAGAATGGTCTGCGCTCGAAGGGGTATCTCGGGTGAAC
ACAGTGATGACATTACCAAGGTTTGTGCCAGACAAAGAAGAGAAGAAAGCTTCTGGAGGA
TCAAAGTCAAAGAAGAAATAG

Peptide Sequence

PEP ID

XP_016442696.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 33 [Nicotiana tabacum]
Sequence

MGSCLSSESRSPHPGSPASSSRKRKSSKKRLGSRNSSFDYHKEELLHRIPGRMFLNGSSE
VASLFSQQGNKGTNQDAMIVWENFGSRTDTVFCGVFDGHGPYGHMVAKRVRDALPLKLST
HWEVNIKSEDVLREISLNRGSSLYPEDASLISEESRVSIDVEDTEKHTEVFQTLKESFLK
AYKVMDRELRSYTNIDCLCSGTTAVTLVKQGKDLVIGNIGDSRAVLCTRGDDDSLTAVQL
TVDLKPNLPAEAERIRKCKGRVFSLHDEPDVARVWMPNSNSPGLAMARAFGDFCLKDFGV
ISVPEISYRRLSEKDEFIILATDGIWDVLSNDEVVKIVASASSRSLAARSLVEVAVRAWK
TTYPTSKVDDCAVVCLFLDSNSNNFSTVSITKDNDKTVMGMSEGGNEMDAAPSPPALNRV
GTVREDEVSAGSKEEASEQEELLPKMGKEWSALEGVSRVNTVMTLPRFVPDKEEKKASGG
SKSKKK

Transcript Sequence

Gene sequence data has not been registered.